BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029D06LP1|AL429053
(930 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1099 1814 0.0
>3x_Contig1099
Length = 3902
Score = 1814 bits (915), Expect = 0.0
Identities = 915/915 (100%)
Strand = Plus / Minus
Query: 16 agaaagcatgatcattttgacgatcatcaggctgaagattcgttgttggatctcttaaga 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2399 agaaagcatgatcattttgacgatcatcaggctgaagattcgttgttggatctcttaaga 2340
Query: 76 tcgaatccgaatccatgcttttcacagtgcctgctatcatggaactcgaccattttgtag 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2339 tcgaatccgaatccatgcttttcacagtgcctgctatcatggaactcgaccattttgtag 2280
Query: 136 tacataaactagatggtctctctgggatgccaatgttagcctcaagccatgactttatta 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2279 tacataaactagatggtctctctgggatgccaatgttagcctcaagccatgactttatta 2220
Query: 196 accagatttcatatatccccttatttgattgcaacaactgtttttggaatactacgttcg 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2219 accagatttcatatatccccttatttgattgcaacaactgtttttggaatactacgttcg 2160
Query: 256 aattgtatgaatgaacgttaatatctttgtcaactgtctctgatgttcgatattccacta 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2159 aattgtatgaatgaacgttaatatctttgtcaactgtctctgatgttcgatattccacta 2100
Query: 316 acaagccaacaagatcccaaaacttggcctctagttcccagttctggaactgttcattat 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2099 acaagccaacaagatcccaaaacttggcctctagttcccagttctggaactgttcattat 2040
Query: 376 cattctcctctccagattctgcaatttccaatgcctcttctccggcaatggacctgaagt 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2039 cattctcctctccagattctgcaatttccaatgcctcttctccggcaatggacctgaagt 1980
Query: 436 cttgcactatagagaacgggtcaagagacgcttcatcgctcaacactcttgcctgatatt 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1979 cttgcactatagagaacgggtcaagagacgcttcatcgctcaacactcttgcctgatatt 1920
Query: 496 ccttcaagatttgtccgaacttcaggtgagtttcctgggaacggttgaagtcaacgtcca 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1919 ccttcaagatttgtccgaacttcaggtgagtttcctgggaacggttgaagtcaacgtcca 1860
Query: 556 tctcgttttattgccgaagttcgcagttcggattcccttctatgcaccgcctgctcaatt 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1859 tctcgttttattgccgaagttcgcagttcggattcccttctatgcaccgcctgctcaatt 1800
Query: 616 ttataccagcttttaacatatccacgatgagtgaatcgtaaacagtgaataccattatat 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1799 ttataccagcttttaacatatccacgatgagtgaatcgtaaacagtgaataccattatat 1740
Query: 676 ggttagctaagtattttgatgaaatcgatattaagaaatcaacattcgtcttagatgatc 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1739 ggttagctaagtattttgatgaaatcgatattaagaaatcaacattcgtcttagatgatc 1680
Query: 736 taggacacatatttactggtgaagtgaacataagcaagcagcgtttgctcaaagcatact 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 taggacacatatttactggtgaagtgaacataagcaagcagcgtttgctcaaagcatact 1620
Query: 796 taaaacggtactgccttgcactgaaagaatattggtactcatatacttgcagaaagtaac 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 taaaacggtactgccttgcactgaaagaatattggtactcatatacttgcagaaagtaac 1560
Query: 856 gatttgacggtcaattatcctatatacatgcaagctttacttctgttttcacgttcagct 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 gatttgacggtcaattatcctatatacatgcaagctttacttctgttttcacgttcagct 1500
Query: 916 gccgtttcttacctt 930
|||||||||||||||
Sbjct: 1499 gccgtttcttacctt 1485
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6002
Number of Sequences: 1807
Number of extensions: 6002
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)